Size distributions and temporal variations of biological aerosol particles in the Amazon rainforest characterized by microscopy and real-time UV-APS fluorescence techniques during AMAZE-08

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Abstract

As a part of the AMAZE-08 campaign during the wet season in the rainforest of central Amazonia, an ultraviolet aerodynamic particle sizer (UV-APS) was operated for continuous measurements of fluorescent biological aerosol particles (FBAP). In the coarse particle size range (> 1 μm) the campaign median and quartiles of FBAP number and mass concentration were 7.3 × 104 m -3 (4.0-13.2 × 104 m-3) and 0.72 μg m -3 (0.42-1.19 μg m-3), respectively, accounting for 24% (11-41%) of total particle number and 47% (25-65%) of total particle mass. During the five-week campaign in February-March 2008 the concentration of coarse-mode Saharan dust particles was highly variable. In contrast, FBAP concentrations remained fairly constant over the course of weeks and had a consistent daily pattern, peaking several hours before sunrise, suggesting observed FBAP was dominated by nocturnal spore emission. This conclusion was supported by the consistent FBAP number size distribution peaking at 2.3 μm, also attributed to fungal spores and mixed biological particles by scanning electron microscopy (SEM), light microscopy and biochemical staining. A second primary biological aerosol particle (PBAP) mode between 0.5 and 1.0 μm was also observed by SEM, but exhibited little fluorescence and no true fungal staining. This mode may have consisted of single bacterial cells, brochosomes, various fragments of biological material, and small Chromalveolata (Chromista) spores. Particles liquid-coated with mixed organic-inorganic material constituted a large fraction of observations, and these coatings contained salts likely from primary biological origin. We provide key support for the suggestion that real-time laser-induce fluorescence (LIF) techniques using 355 nm excitation provide size-resolved concentrations of FBAP as a lower limit for the atmospheric abundance of biological particles in a pristine environment. We also show some limitations of using the instrument for ambient monitoring of weakly fluorescent particles < 2 μm. Our measurements confirm that primary biological particles, fungal spores in particular, are an important fraction of supermicron aerosol in the Amazon and that may contribute significantly to hydrological cycling, especially when coated by mixed inorganic material. © 2012 Author(s).

Figures

  • Fig. 1. Time series of particle concentrations. Each panel: integrated values (upper left), ratio of fluorescent to total (upper right), and sizeresolved measurements. (A) total number (NT,c), (B) FBAP number (NF,c), (C) total mass (MT,c), (D) FBAP mass (MF,c). Dashed line at 1 µm indicates lower bound of number integration; mass is unit-normalized.
  • Fig. 2. Average particle number and unit-normalized mass size distributions for the measurement campaign (all points in Fig. 1). Hatched area indicates that only particles larger than 1.0 µm were integrated for number and mass concentrations. (A) total number (dNT/dlogDa), (B) FBAP number (dNT/dlogDa), (C) total mass (dMT/dlogDa), (D) FBAP mass (dMF/dlogDa).
  • Fig. 3. Average size distribution of FBAP to total ratio for the measurement campaign (dNF/dNT = dMF/dMT).
  • Fig. 4. Statistical distribution of integrated coarse FBAP and total number and unit-normalized mass concentrations (1–20 µm) for each of three periods: entire campaign, low dust focus period, high dust focus period. (A) NT,c, (B) NF,c, (C) NF,c/NT,c, (D) MT,c, (E) MF,c, (F) MF,c/MT,c.
  • Table 1. Integrated number and unit-normalized mass concentrations of coarse FBAP and total particles (1–20 µm). Arithmetic mean and median values shown for: Period 1 (2–19 February 2008), Period 2 (4–15 March 2008), High Dust focus period (2867 min average), Low Dust focus period (5608 min average), and entire campaign.
  • Fig. 5. Comparison of particle size distributions acquired from counting particles on filters using SEM (top panels) and in real-time from UVAPS (bottom panels). Colored areas are stacked in each case such that top line reflects the total concentration from each analysis technique. Upper panels: regions of solid color indicate uncoated particles, diagonal bars indicate particles coated with organic material. (A) Low Dust period (Average of sample numbers M04, M08, M12; 5608 min total), (B) High Dust period (Average of sample numbers M07, M30; 3867 min total). Size distribution from each analysis plotted with respect to its own method of particle size determination. Upper SEM panels shown versus physical diameter (Dp), as defined by visual determination through microscopy. Lower UV-APS panels shown versus aerodynamic diameter (Da), operationally defined as the size a particle acts in a flowing stream of air as if it were condensed into a sphere of unit density (DeCarlo et al., 2004).
  • Fig. 6. Comparison of particle size distributions from three techniques: (A) lactophenol blue fungal (chitin) stain, (B) counts from SEM analysis, (C) UV-APS. Colored areas are stacked plots. For middle panel, regions of solid color indicate uncoated particles, diagonal bars indicate particles coated with organic material.
  • Fig. 7. Scanning electron micrographs showing example PBAP images from AMAZE-08 campaign. Scale bar shown in each panel.

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APA

Huffman, J. A., Sinha, B., Garland, R. M., Snee-Pollmann, A., Gunthe, S. S., Artaxo, P., … Pöschl, U. (2012). Size distributions and temporal variations of biological aerosol particles in the Amazon rainforest characterized by microscopy and real-time UV-APS fluorescence techniques during AMAZE-08. Atmospheric Chemistry and Physics, 12(24), 11997–12019. https://doi.org/10.5194/acp-12-11997-2012

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