Long-term impacts of antibiotic exposure on the human intestinal microbiota

834Citations
Citations of this article
1.5kReaders
Mendeley users who have this article in their library.

Abstract

Although it is known that antibiotics have short-term impacts on the human microbiome, recent evidence demonstrates that the impacts of some antibiotics remain for extended periods of time. In addition, antibiotic-resistant strains can persist in the human host environment in the absence of selective pressure. Both molecular- and cultivation-based approaches have revealed ecological disturbances in the microbiota after antibiotic administration, in particular for specific members of the bacterial community that are susceptible or alternatively resistant to the antibiotic in question. A disturbing consequence of antibiotic treatment has been the long-term persistence of antibiotic resistance genes, for example in the human gut. These data warrant use of prudence in the administration of antibiotics that could aggravate the growing battle with emerging antibiotic-resistant pathogenic strains. © 2010 SGM.

Figures

  • Fig. 1. Representation of the impact of antibiotic administration on the bacterial community of the colon. After the onset of treatment, an increase in resistant bacteria (purple rods) can be seen. This increase is due to either a susceptible bacterium (green rods) becoming resistant or resistant bacteria, already present in low levels, increasing in number due to their ability to survive the selective pressure provided by the antibiotic. The acquired resistance is often due to horizontal gene transfer or mutation events (white arrow). As a consequence of treatment, a temporary decrease in diversity can also be seen. Some bacteria may be protected from antibiotic exposure in the mucin layer (yellow shading) or in grooves in between the villi formed by host epithelial cells that line the intestinal channel (not shown). The figure is not drawn to scale and the timescale is relative.
  • Table 1. Impact of selected groups of antibiotics on the normal intestinal microbiota assessed by cultivation and MIC values
  • Fig. 2. Examples of experimental approaches that are currently used to assess the impact of antibiotic administration on the human microbiota. Rep-PCR, PCR of repetitive clonal elements; AP-PCR, arbitrarily-primed PCR; MLVA, multiple loci variable number tandem repeat analysis.
  • Fig. 3. Long-term impacts of a 7 day clindamycin administration on the human faecal microbiome. Faecal samples were collected before antibiotic administration (day 0), on the last day of antibiotic administration (day 7), 2 weeks after cessation of treatment (day 21), subsequently every 3 months for 1 year post-administration, and 18 months and 2 years postadministration. (a) Correspondence analysis (COA) plots of T-RFLP fingerprints over time from one subject exposed to clindamycin, showing shifts in the dominant members of the bacterial community (i) and the Bacteroides community (ii). (b) Normalized relative gene abundance of three specific erm genes compared with day 0. Representatives of one clindamycinexposed subject (i) and one non-exposed subject (ii) are shown. (c) Bacteroides isolates from one clindamycin-exposed subject that were clonally typed using Rep-PCR. Bars with hatched lines represent clones susceptible to clindamycin and bars with solid lines represent resistant clones. This figure is adapted from a previous paper (Jernberg et al., 2007).

References Powered by Scopus

A human gut microbial gene catalogue established by metagenomic sequencing

9006Citations
N/AReaders
Get full text

Microbial ecology: Human gut microbes associated with obesity

7381Citations
N/AReaders
Get full text

Microbiology: Diversity of the human intestinal microbial flora

6426Citations
N/AReaders
Get full text

Cited by Powered by Scopus

Intestinal microbial metabolism of phosphatidylcholine and cardiovascular risk

2634Citations
N/AReaders
Get full text

The role of the gut microbiota in nutrition and health

1559Citations
N/AReaders
Get full text

A decrease of the butyrate-producing species roseburia hominis and faecalibacterium prausnitzii defines dysbiosis in patients with ulcerative colitis

1435Citations
N/AReaders
Get full text

Register to see more suggestions

Mendeley helps you to discover research relevant for your work.

Already have an account?

Cite

CITATION STYLE

APA

Jernberg, C., Löfmark, S., Edlund, C., & Jansson, J. K. (2010, November). Long-term impacts of antibiotic exposure on the human intestinal microbiota. Microbiology. https://doi.org/10.1099/mic.0.040618-0

Readers over time

‘10‘11‘12‘13‘14‘15‘16‘17‘18‘19‘20‘21‘22‘23‘24‘25055110165220

Readers' Seniority

Tooltip

PhD / Post grad / Masters / Doc 613

67%

Researcher 186

20%

Professor / Associate Prof. 87

10%

Lecturer / Post doc 27

3%

Readers' Discipline

Tooltip

Agricultural and Biological Sciences 346

39%

Medicine and Dentistry 257

29%

Biochemistry, Genetics and Molecular Bi... 174

20%

Immunology and Microbiology 101

12%

Article Metrics

Tooltip
Mentions
Blog Mentions: 2
News Mentions: 7
References: 1
Social Media
Shares, Likes & Comments: 11

Save time finding and organizing research with Mendeley

Sign up for free
0