LSD1/KDM1 isoform LSD1+8a contributes to neural differentiation in small cell lung cancer

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Abstract

Small cell lung cancer (SCLC) is an aggressive neuroendocrine tumor characterized by rapid progression. The mechanisms that lead to a shift from initial therapeutic sensitivity to ultimate therapeutic resistance are poorly understood. Although the SCLC genomic landscape led to the discovery of promising agents targeting genetic alterations that were already under investigation, results have been disappointing. Achievements in targeted therapeutics have not been observed for over 30 years. Therefore, the underlying disease biology and novel targets urgently require a better understanding. Epigenetic regulation is deeply involved in the cellular plasticity that could shift tumor cells to the malignant phenotype. We have focused on a histone modifier, LSD1, that is overexpressed in SCLC and is a potent therapeutic target. Interestingly, the LSD1 splice variant LSD1+8a, the expression of which has been reported to be restricted to neural tissue, was detected and was involved in the expression of neuroendocrine marker genes in SCLC cell lines. Cells with high expression of LSD1+8a were resistant to CDDP and LSD1 inhibitor. Moreover, suppression of LSD1+8a inhibited cell proliferation, indicating that LSD1+8a could play a critical role in SCLC. These findings suggest that LSD1+8a should be considered a novel therapeutic target in SCLC.

Figures

  • Table 1 Neuroendocrine marker gene expression from RNA sequencing data in the Cancer Cell Line Encyclopedia (CCLE).
  • Table 2 Stem cell marker gene expression from RNA sequencing data in CCLE.
  • Fig. 1. Expression of LSD1 and LSD1+8a in cancer cell lines and human samples. A) LSD1 mRNA expression in SCLC, NSCLC, and cervical cancer cell lines was analyzed by qPCR. B) LSD1 protein expression in SCLC, NSCLC, and cervical cancer cell lines was analyzed by western blotting. GAPDH was used as loading control. The bar graph on the bottom shows relative abundance of LSD1, which was determined by calculating the ratio of LSD1 intensity to that of GAPDH. C) LSD1+8a mRNA expression in SCLC cell lines was analyzed by qPCR. D) LSD1 and LSD1+8a mRNA expression in surgical specimens in patients with SCLC was analyzed by qPCR. Data are presented as the mean ± S.D. in triplicate experiments.
  • Fig. 2. Pearson correlation of LSD1+8a and neuroendocrine marker gene expression in human cancer cell lines. A) Chromogranin A (CHGA), B) synaptophysin (SYP), C) neural cell adhesion molecule (NCAM), D) enolase 2 (ENO2), E) beta-1,3-glucuronyltransferase 1 (B3CAT1), and F) gastrin-releasing peptide (GRP) mRNA expression in 12 human cancer cell lines was analyzed by qPCR. Pearson's correlation coefficient is displayed in the upper left corner.
  • Fig. 3. Effect of LSD1+8a suppression by siRNA on expression of neuroendocrine marker genes. A) LSD1 and LSD1+8a mRNA expression was analyzed by qPCR in H187 and H446 cells transfected with specific siRNA against LSD1 exon 8a or control siRNA. The expression of each control mRNA was set to one. B) Chromogranin A (CHGA), synaptophysin (SYP), neural cell adhesion molecule (NCAM), enolase 2 (ENO2), and beta-1,3-glucuronyltransferase 1 (B3CAT1) mRNA expression was analyzed by qPCR in H187 and H446 transfected with specific siRNA against LSD1 exon 8a. Expression of each control mRNA was set to one. C) SOX2, POU5F1B, KLF4, MYC, CD44, and PROM1 mRNA expression was analyzed by qPCR in H187 and H446 transfected with specific siRNA against LSD1 exon 8a. Expression of each control mRNA was set to one. Data are presented as the mean ± S.D. in triplicate experiments. *P < 0.05 vs siLSD1+8a # 1. +P < 0.05 vs siLSD1+8a # 2.
  • Fig. 4. Effect of LSD1+8a suppression by siRNA on the cell viability. A) A cell proliferation assay was performed using H187 and H446 cells transfected with siLSD1+8a or control siRNA at 24, 48, and 72 h. The optical density at 24 h was set to one. B) A cell proliferation assay was performed using SBC3 and SBC5 cells transfected with siLSD1+8a or control siRNA at 24, 48, and 72 h. The optical density at 24 h was set to one. Data are presented as the mean ± S.D. in triplicate experiments. *P < 0.05 vs siLSD1+8a # 1. +P < 0.05 vs siLSD1+8a # 2.
  • Fig. 5. In vitro chemosensitivity assay in SCLC cell lines. SCLC cell lines including H446, H187, SBC3, and SBC5 were seeded in 96-well flat bottom plates and cultured for 72 h or 7 days in the absence or presence of various concentrations of cisplatin (CDDP; A) and LSD1 inhibitor (S2101; B). IC50 values are presented as the mean ± S.D. in triplicate experiments. *P < 0.05 vs H446. +P < 0.05 vs H187.

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Jotatsu, T., Yagishita, S., Tajima, K., Takahashi, F., Mogushi, K., Hidayat, M., … Takahashi, K. (2017). LSD1/KDM1 isoform LSD1+8a contributes to neural differentiation in small cell lung cancer. Biochemistry and Biophysics Reports, 9, 86–94. https://doi.org/10.1016/j.bbrep.2016.11.015

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